Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scn3aA2ASI5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm13549-201ENSMUST00000118339 796 ntBASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm25830-201ENSMUST00000158923 132 ntBASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Snord55-201ENSMUST00000174939 79 ntBASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm8255-201ENSMUST00000218693 305 ntBASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm25201-201ENSMUST00000083093 170 ntBASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm7255-201ENSMUST00000187371 908 ntBASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm35713-201ENSMUST00000210516 199 ntBASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Scn3aA2ASI5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Gm24791-201ENSMUST00000104284 131 ntBASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Gm7719-201ENSMUST00000182374 975 ntBASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Gm6423-201ENSMUST00000204315 934 ntBASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scn3aA2ASI5 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms