Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm14071-201ENSMUST00000117817 509 ntBASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm12501-201ENSMUST00000119163 529 ntBASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm8566-201ENSMUST00000120174 465 ntBASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm28450-201ENSMUST00000187349 638 ntBASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm10254-201ENSMUST00000052888 867 ntBASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Mir433-201ENSMUST00000093564 124 ntBASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm42498-201ENSMUST00000199981 1372 ntBASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm5422-201ENSMUST00000050717 2721 ntBASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm11500-201ENSMUST00000118237 601 ntBASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm16481-201ENSMUST00000119074 1227 ntBASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm8815-201ENSMUST00000173809 620 ntBASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm27341-201ENSMUST00000183570 106 ntBASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 AC134869.4-202ENSMUST00000224350 837 ntBASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 AC151275.1-201ENSMUST00000224870 585 ntBASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm37849-201ENSMUST00000194722 1881 ntBASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm44573-201ENSMUST00000191753 2370 ntBASIC8.32□□□□□ -1.08
Trav9n-2A0A0G2JDP3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms