Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Gm43242-201ENSMUST00000199507 1776 ntBASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Gm9796-201ENSMUST00000062249 2250 ntBASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trav8-1A0A075B641 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm35850-202ENSMUST00000211705 2120 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 AC153380.1-201ENSMUST00000214959 2364 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm45041-201ENSMUST00000207366 3108 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm23912-201ENSMUST00000104687 87 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm11700-201ENSMUST00000119409 403 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm28911-201ENSMUST00000188837 117 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm37497-201ENSMUST00000195830 798 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm7287-201ENSMUST00000205267 602 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm45668-201ENSMUST00000211271 493 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 AC126253.1-202ENSMUST00000226732 835 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 AC108416.1-202ENSMUST00000228927 1201 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 AC154352.1-201ENSMUST00000221477 2365 ntBASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC8.18□□□□□ -1.1
Trav8-1A0A075B641 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms