Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H2afb2S4R1M3 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Ntng1-201ENSMUST00000051253 327 ntBASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
H2afb2S4R1M3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm7857-201ENSMUST00000117957 358 ntBASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm8731-201ENSMUST00000118088 412 ntBASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm15566-201ENSMUST00000121130 590 ntBASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm6905-201ENSMUST00000205729 511 ntBASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm18056-201ENSMUST00000207670 568 ntBASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm18061-201ENSMUST00000208350 562 ntBASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm18063-201ENSMUST00000208529 568 ntBASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm18052-201ENSMUST00000208750 559 ntBASIC11.47□□□□□ -0.57
H2afb2S4R1M3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms