Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm8343-201ENSMUST00000182705 994 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm27627-201ENSMUST00000183644 150 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm28937-201ENSMUST00000185413 695 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm29400-201ENSMUST00000187208 695 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm28662-201ENSMUST00000188446 695 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm28251-201ENSMUST00000188835 695 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm37318-201ENSMUST00000194325 695 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm38017-201ENSMUST00000194768 695 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm37287-201ENSMUST00000195449 695 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm37793-201ENSMUST00000195548 695 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H2afb3S4R1G7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm13665-201ENSMUST00000120830 528 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm38341-201ENSMUST00000195357 515 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gm38317-201ENSMUST00000195564 343 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Lect2-202ENSMUST00000225183 823 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
H2afb3S4R1G7 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms