Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Gm15617-201ENSMUST00000118973 771 ntBASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Gm7939-201ENSMUST00000201233 1050 ntBASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 BC080696-201ENSMUST00000202858 1218 ntBASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Gm2448-201ENSMUST00000207080 559 ntBASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Gm37651-201ENSMUST00000194679 1494 ntBASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hdac6Q9Z2V5 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Gm23745-201ENSMUST00000104230 125 ntBASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Gm11475-201ENSMUST00000118482 476 ntBASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Gm25569-201ENSMUST00000157175 131 ntBASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Gm27956-201ENSMUST00000175604 260 ntBASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Gm20781-201ENSMUST00000193154 693 ntBASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Gm21736-201ENSMUST00000195399 693 ntBASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 CT030652.1-201ENSMUST00000227377 1235 ntBASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hdac6Q9Z2V5 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Gm15519-201ENSMUST00000120088 1566 ntBASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Gm12129-201ENSMUST00000120104 1147 ntBASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Gm13204-201ENSMUST00000120110 821 ntBASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Gm3329-201ENSMUST00000159873 556 ntBASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms