Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.64□□□□□ -0.71
ClcnkaQ9WUB7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm14724-201ENSMUST00000118400 537 ntBASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm12501-201ENSMUST00000119163 529 ntBASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm8566-201ENSMUST00000120174 465 ntBASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm27552-201ENSMUST00000183351 62 ntBASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm27844-201ENSMUST00000183613 62 ntBASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm27530-201ENSMUST00000184096 98 ntBASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm38314-201ENSMUST00000195709 625 ntBASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
ClcnkaQ9WUB7 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Gm8100-201ENSMUST00000182906 988 ntBASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Gm2965-201ENSMUST00000198365 343 ntBASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Gm43002-201ENSMUST00000200310 155 ntBASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Gm5363-201ENSMUST00000211927 938 ntBASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Gm21811-201ENSMUST00000096485 930 ntBASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
ClcnkaQ9WUB7 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms