Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Gm11500-201ENSMUST00000118237 601 ntBASIC11.07□□□□□ -0.64
SrfQ9JM73 Gm15549-201ENSMUST00000121595 622 ntBASIC11.07□□□□□ -0.64
SrfQ9JM73 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Gm22846-201ENSMUST00000157706 270 ntBASIC11.07□□□□□ -0.64
SrfQ9JM73 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.07□□□□□ -0.64
SrfQ9JM73 Gm9081-201ENSMUST00000182346 991 ntBASIC11.07□□□□□ -0.64
SrfQ9JM73 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.07□□□□□ -0.64
SrfQ9JM73 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.07□□□□□ -0.64
SrfQ9JM73 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.07□□□□□ -0.64
SrfQ9JM73 Gm18968-201ENSMUST00000221319 862 ntBASIC11.07□□□□□ -0.64
SrfQ9JM73 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SrfQ9JM73 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SrfQ9JM73 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SrfQ9JM73 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.07□□□□□ -0.64
SrfQ9JM73 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.07□□□□□ -0.64
SrfQ9JM73 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.07□□□□□ -0.64
SrfQ9JM73 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.07□□□□□ -0.64
SrfQ9JM73 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SrfQ9JM73 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.07□□□□□ -0.64
SrfQ9JM73 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SrfQ9JM73 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SrfQ9JM73 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SrfQ9JM73 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.06□□□□□ -0.64
SrfQ9JM73 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SrfQ9JM73 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.06□□□□□ -0.64
SrfQ9JM73 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm8302-201ENSMUST00000119217 852 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm25545-201ENSMUST00000122673 323 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm25492-201ENSMUST00000157383 129 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm23776-201ENSMUST00000158993 325 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm8185-201ENSMUST00000160999 669 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm17214-201ENSMUST00000164501 541 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC11.06□□□□□ -0.64
SrfQ9JM73 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm17825-201ENSMUST00000206836 794 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
SrfQ9JM73 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm39288-201ENSMUST00000210554 446 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm45500-201ENSMUST00000211676 803 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm6390-201ENSMUST00000215034 589 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.06□□□□□ -0.64
SrfQ9JM73 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.06□□□□□ -0.64
SrfQ9JM73 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SrfQ9JM73 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.06□□□□□ -0.64
SrfQ9JM73 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SrfQ9JM73 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
SrfQ9JM73 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms