Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Gm11511-201ENSMUST00000118146 540 ntBASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tubb3Q9ERD7 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Mir1943-201ENSMUST00000158276 73 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm3332-201ENSMUST00000189337 928 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm9555-201ENSMUST00000200908 583 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm8956-201ENSMUST00000203939 825 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Tubb3Q9ERD7 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Tubb3Q9ERD7 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms