Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Snf8Q9CZ28 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Mir8109-201ENSMUST00000184375 117 ntBASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gm38266-201ENSMUST00000194931 421 ntBASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Snf8Q9CZ28 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Mir1938-201ENSMUST00000158746 100 ntBASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Gm45865-201ENSMUST00000211815 945 ntBASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Gm21769-201ENSMUST00000211922 111 ntBASIC11.82□□□□□ -0.52
Snf8Q9CZ28 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.82□□□□□ -0.52
Snf8Q9CZ28 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Snf8Q9CZ28 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms