Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smc1aQ9CU62 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm13888-201ENSMUST00000119148 422 ntBASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm23119-201ENSMUST00000158610 140 ntBASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm37246-201ENSMUST00000192665 835 ntBASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm807-202ENSMUST00000224929 408 ntBASIC12.91□□□□□ -0.34
Smc1aQ9CU62 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm5455-201ENSMUST00000058710 715 ntBASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm26448-201ENSMUST00000082446 203 ntBASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smc1aQ9CU62 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Gm24891-201ENSMUST00000104391 136 ntBASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Gm12029-201ENSMUST00000120073 832 ntBASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Gm23085-201ENSMUST00000157849 293 ntBASIC12.9□□□□□ -0.34
Smc1aQ9CU62 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Gm45219-201ENSMUST00000205602 465 ntBASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Gm44882-201ENSMUST00000205702 802 ntBASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Smc1aQ9CU62 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Smc1aQ9CU62 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smc1aQ9CU62 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smc1aQ9CU62 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms