Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm5714-201ENSMUST00000197343 566 ntBASIC10.14□□□□□ -0.79
Scrt1Q99M85 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.14□□□□□ -0.79
Scrt1Q99M85 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Scrt1Q99M85 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.13□□□□□ -0.79
Scrt1Q99M85 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.13□□□□□ -0.79
Scrt1Q99M85 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm18711-201ENSMUST00000199341 750 ntBASIC10.13□□□□□ -0.79
Scrt1Q99M85 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.13□□□□□ -0.79
Scrt1Q99M85 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.13□□□□□ -0.79
Scrt1Q99M85 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.13□□□□□ -0.79
Scrt1Q99M85 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.13□□□□□ -0.79
Scrt1Q99M85 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Scrt1Q99M85 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm15036-201ENSMUST00000118880 400 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm5419-201ENSMUST00000119301 527 ntBASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms