Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.17□□□□□ -0.46
Clp1Q99LI9 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Clp1Q99LI9 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.17□□□□□ -0.46
Clp1Q99LI9 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.17□□□□□ -0.46
Clp1Q99LI9 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Gm9487-201ENSMUST00000216600 472 ntBASIC12.17□□□□□ -0.46
Clp1Q99LI9 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Capsl-202ENSMUST00000226688 739 ntBASIC12.17□□□□□ -0.46
Clp1Q99LI9 AC125539.1-201ENSMUST00000227423 622 ntBASIC12.17□□□□□ -0.46
Clp1Q99LI9 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.17□□□□□ -0.46
Clp1Q99LI9 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.17□□□□□ -0.46
Clp1Q99LI9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.17□□□□□ -0.46
Clp1Q99LI9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Clp1Q99LI9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clp1Q99LI9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.16□□□□□ -0.46
Clp1Q99LI9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Gm11700-201ENSMUST00000119409 403 ntBASIC12.16□□□□□ -0.46
Clp1Q99LI9 Gm25226-201ENSMUST00000158198 123 ntBASIC12.16□□□□□ -0.46
Clp1Q99LI9 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Gm26272-201ENSMUST00000179241 132 ntBASIC12.16□□□□□ -0.46
Clp1Q99LI9 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Id2-203ENSMUST00000222667 958 ntBASIC12.16□□□□□ -0.46
Clp1Q99LI9 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.16□□□□□ -0.46
Clp1Q99LI9 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.16□□□□□ -0.46
Clp1Q99LI9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.16□□□□□ -0.46
Clp1Q99LI9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Clp1Q99LI9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms