Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm25063-201ENSMUST00000104666 94 ntBASIC13.35□□□□□ -0.27
Smc1bQ920F6 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm12948-201ENSMUST00000119406 682 ntBASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm11836-201ENSMUST00000121022 441 ntBASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm8531-201ENSMUST00000188319 893 ntBASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm18711-201ENSMUST00000199341 750 ntBASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm6722-201ENSMUST00000221586 390 ntBASIC13.35□□□□□ -0.27
Smc1bQ920F6 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.35□□□□□ -0.27
Smc1bQ920F6 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.35□□□□□ -0.27
Smc1bQ920F6 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smc1bQ920F6 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.34□□□□□ -0.27
Smc1bQ920F6 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Cog3-203ENSMUST00000227473 4197 ntBASIC13.34□□□□□ -0.27
Smc1bQ920F6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.34□□□□□ -0.27
Smc1bQ920F6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.34□□□□□ -0.27
Smc1bQ920F6 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.34□□□□□ -0.27
Smc1bQ920F6 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.34□□□□□ -0.27
Smc1bQ920F6 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.34□□□□□ -0.27
Smc1bQ920F6 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.34□□□□□ -0.27
Smc1bQ920F6 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smc1bQ920F6 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smc1bQ920F6 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smc1bQ920F6 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smc1bQ920F6 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.33□□□□□ -0.27
Smc1bQ920F6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
Smc1bQ920F6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smc1bQ920F6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smc1bQ920F6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smc1bQ920F6 Gm12579-201ENSMUST00000118040 783 ntBASIC13.33□□□□□ -0.28
Smc1bQ920F6 Gm12990-201ENSMUST00000120372 468 ntBASIC13.33□□□□□ -0.28
Smc1bQ920F6 Gm13022-201ENSMUST00000121181 285 ntBASIC13.33□□□□□ -0.28
Smc1bQ920F6 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smc1bQ920F6 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smc1bQ920F6 Gm24398-201ENSMUST00000157870 109 ntBASIC13.33□□□□□ -0.28
Smc1bQ920F6 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Smc1bQ920F6 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.33□□□□□ -0.28
Smc1bQ920F6 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.33□□□□□ -0.28
Smc1bQ920F6 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.33□□□□□ -0.28
Smc1bQ920F6 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smc1bQ920F6 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.33□□□□□ -0.28
Smc1bQ920F6 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smc1bQ920F6 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.33□□□□□ -0.28
Smc1bQ920F6 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.33□□□□□ -0.28
Smc1bQ920F6 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Smc1bQ920F6 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.32□□□□□ -0.28
Smc1bQ920F6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smc1bQ920F6 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms