Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.95□□□□□ -0.5
Pcdhb1Q91Y08 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Gm12247-201ENSMUST00000117585 670 ntBASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Gm12217-201ENSMUST00000118858 696 ntBASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb1Q91Y08 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Mir6927-201ENSMUST00000184494 71 ntBASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb1Q91Y08 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms