Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Gm37582-201ENSMUST00000192953 1409 ntBASIC13.34□□□□□ -0.27
StrcQ8VIM6 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.34□□□□□ -0.27
StrcQ8VIM6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Fam220-ps-201ENSMUST00000116535 783 ntBASIC13.34□□□□□ -0.27
StrcQ8VIM6 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC13.34□□□□□ -0.27
StrcQ8VIM6 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Gm22763-201ENSMUST00000158374 107 ntBASIC13.34□□□□□ -0.27
StrcQ8VIM6 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC13.34□□□□□ -0.27
StrcQ8VIM6 CT025679.1-201ENSMUST00000227106 449 ntBASIC13.34□□□□□ -0.27
StrcQ8VIM6 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
StrcQ8VIM6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
StrcQ8VIM6 Gm29101-201ENSMUST00000188329 1471 ntBASIC13.33□□□□□ -0.27
StrcQ8VIM6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
StrcQ8VIM6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
StrcQ8VIM6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
StrcQ8VIM6 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
StrcQ8VIM6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Gm14231-201ENSMUST00000120090 592 ntBASIC13.33□□□□□ -0.28
StrcQ8VIM6 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.33□□□□□ -0.28
StrcQ8VIM6 Gm18391-201ENSMUST00000217189 658 ntBASIC13.33□□□□□ -0.28
StrcQ8VIM6 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC13.33□□□□□ -0.28
StrcQ8VIM6 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Gm18042-201ENSMUST00000219887 790 ntBASIC13.33□□□□□ -0.28
StrcQ8VIM6 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
StrcQ8VIM6 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Gm6276-201ENSMUST00000120159 579 ntBASIC13.32□□□□□ -0.28
StrcQ8VIM6 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 CU025215.1-201ENSMUST00000222986 603 ntBASIC13.32□□□□□ -0.28
StrcQ8VIM6 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.32□□□□□ -0.28
StrcQ8VIM6 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC13.32□□□□□ -0.28
StrcQ8VIM6 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
StrcQ8VIM6 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms