Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Gm18730-201ENSMUST00000218038 343 ntBASIC9.64□□□□□ -0.87
H1fooQ8VIK3 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
H1fooQ8VIK3 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Gm11439-201ENSMUST00000118598 409 ntBASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Gm7003-201ENSMUST00000195089 312 ntBASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.63□□□□□ -0.87
H1fooQ8VIK3 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
H1fooQ8VIK3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
H1fooQ8VIK3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms