Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.88□□□□□ -0.51
Trim60Q8VI40 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Gm20482-202ENSMUST00000174729 825 ntBASIC11.88□□□□□ -0.51
Trim60Q8VI40 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.88□□□□□ -0.51
Trim60Q8VI40 Gm44008-201ENSMUST00000204345 412 ntBASIC11.88□□□□□ -0.51
Trim60Q8VI40 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Gm26448-201ENSMUST00000082446 203 ntBASIC11.88□□□□□ -0.51
Trim60Q8VI40 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.88□□□□□ -0.51
Trim60Q8VI40 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim60Q8VI40 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.87□□□□□ -0.51
Trim60Q8VI40 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Gm11783-201ENSMUST00000119549 885 ntBASIC11.87□□□□□ -0.51
Trim60Q8VI40 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.87□□□□□ -0.51
Trim60Q8VI40 Gm18038-201ENSMUST00000197900 485 ntBASIC11.87□□□□□ -0.51
Trim60Q8VI40 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.87□□□□□ -0.51
Trim60Q8VI40 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.87□□□□□ -0.51
Trim60Q8VI40 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.87□□□□□ -0.51
Trim60Q8VI40 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.87□□□□□ -0.51
Trim60Q8VI40 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.87□□□□□ -0.51
Trim60Q8VI40 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim60Q8VI40 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.86□□□□□ -0.51
Trim60Q8VI40 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms