Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm13809-201ENSMUST00000117921 597 ntBASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm12566-201ENSMUST00000121479 359 ntBASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rfwd3Q8CIK8 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rfwd3Q8CIK8 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms