Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Gm8566-201ENSMUST00000120174 465 ntBASIC14.17□□□□□ -0.14
Smc5Q8CG46 Gm8876-201ENSMUST00000120768 1122 ntBASIC14.17□□□□□ -0.14
Smc5Q8CG46 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.17□□□□□ -0.14
Smc5Q8CG46 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC14.17□□□□□ -0.14
Smc5Q8CG46 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.17□□□□□ -0.14
Smc5Q8CG46 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.17□□□□□ -0.14
Smc5Q8CG46 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.17□□□□□ -0.14
Smc5Q8CG46 AC124577.2-201ENSMUST00000217413 2420 ntBASIC14.17□□□□□ -0.14
Smc5Q8CG46 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smc5Q8CG46 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Rgr-203ENSMUST00000225070 4704 ntBASIC14.16□□□□□ -0.14
Smc5Q8CG46 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 AC154404.1-201ENSMUST00000223601 2077 ntBASIC14.16□□□□□ -0.14
Smc5Q8CG46 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Gm23949-201ENSMUST00000104027 127 ntBASIC14.16□□□□□ -0.14
Smc5Q8CG46 Gm23596-201ENSMUST00000104304 132 ntBASIC14.16□□□□□ -0.14
Smc5Q8CG46 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Gm15374-201ENSMUST00000119313 844 ntBASIC14.16□□□□□ -0.14
Smc5Q8CG46 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Gm18038-201ENSMUST00000197900 485 ntBASIC14.16□□□□□ -0.14
Smc5Q8CG46 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.16□□□□□ -0.14
Smc5Q8CG46 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.16□□□□□ -0.14
Smc5Q8CG46 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc5Q8CG46 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 AC154171.2-201ENSMUST00000225219 2652 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 Gm11663-201ENSMUST00000117888 290 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 Gm26047-201ENSMUST00000157308 113 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 Gm8815-201ENSMUST00000173809 620 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 Mir7677-201ENSMUST00000184226 67 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 Gm26047-202ENSMUST00000198840 115 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 Gm6722-201ENSMUST00000221586 390 ntBASIC14.15□□□□□ -0.14
Smc5Q8CG46 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms