Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Gm14277-201ENSMUST00000121195 360 ntBASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Gm43966-201ENSMUST00000203301 612 ntBASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Gm5363-201ENSMUST00000211927 938 ntBASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Gm18065-201ENSMUST00000221395 526 ntBASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.21□□□□□ -0.46
Ccdc87Q8CDL9 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Gm13996-201ENSMUST00000118456 430 ntBASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Gm8956-201ENSMUST00000203939 825 ntBASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.2□□□□□ -0.46
Ccdc87Q8CDL9 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms