Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nhlrc3Q8CCH2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Gm2991-201ENSMUST00000173338 480 ntBASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Rprl1-202ENSMUST00000198476 238 ntBASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Gm6450-201ENSMUST00000200896 574 ntBASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Gm43966-201ENSMUST00000203301 612 ntBASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Gm18062-201ENSMUST00000208020 547 ntBASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Gm18055-201ENSMUST00000208254 547 ntBASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nhlrc3Q8CCH2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm11500-201ENSMUST00000118237 601 ntBASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm17420-201ENSMUST00000164753 153 ntBASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 AY702102-202ENSMUST00000194651 1173 ntBASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm9368-201ENSMUST00000219348 831 ntBASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nhlrc3Q8CCH2 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms