Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim9Q8C7M3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm12463-201ENSMUST00000118271 849 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm18367-201ENSMUST00000176139 600 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm8342-201ENSMUST00000209839 757 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm5996-201ENSMUST00000211110 718 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm45856-201ENSMUST00000212752 416 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm19208-201ENSMUST00000213861 912 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Ginm1-202ENSMUST00000065124 300 ntBASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim9Q8C7M3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim9Q8C7M3 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.65□□□□□ -0.39
Trim9Q8C7M3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim9Q8C7M3 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Gm25148-201ENSMUST00000104611 123 ntBASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Gm15329-201ENSMUST00000121408 155 ntBASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Gm15549-201ENSMUST00000121595 622 ntBASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Gm10774-201ENSMUST00000188689 204 ntBASIC12.64□□□□□ -0.39
Trim9Q8C7M3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.64□□□□□ -0.39
Trim9Q8C7M3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.64□□□□□ -0.39
Trim9Q8C7M3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.64□□□□□ -0.39
Trim9Q8C7M3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim9Q8C7M3 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms