Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.85□□□□□ -0.67
Ska3Q8C263 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm8731-201ENSMUST00000118088 412 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm10774-201ENSMUST00000188689 204 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm4978-201ENSMUST00000071565 801 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ska3Q8C263 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.84□□□□□ -0.67
Ska3Q8C263 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ska3Q8C263 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Gm12165-201ENSMUST00000117047 342 ntBASIC10.83□□□□□ -0.68
Ska3Q8C263 Gm13045-201ENSMUST00000119019 712 ntBASIC10.83□□□□□ -0.68
Ska3Q8C263 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Gm3150-201ENSMUST00000166418 204 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms