Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm28205-201ENSMUST00000189177 697 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm29032-201ENSMUST00000189797 697 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm28695-201ENSMUST00000190300 697 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm37448-201ENSMUST00000192795 697 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm43184-201ENSMUST00000197247 542 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm8913-201ENSMUST00000209491 641 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Gm26083-201ENSMUST00000157904 193 ntBASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 CT868720.1-201ENSMUST00000223069 2544 ntBASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc40Q8BI79 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms