Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf38Q8BI21 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Gm11509-201ENSMUST00000117358 325 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Gm32999-201ENSMUST00000192693 562 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 AA914427-201ENSMUST00000193194 1166 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Rprl1-202ENSMUST00000198476 238 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Gm6450-201ENSMUST00000200896 574 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Gm9797-202ENSMUST00000218003 294 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf38Q8BI21 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm17980-201ENSMUST00000217977 2349 ntBASIC11.11□□□□□ -0.63
Rnf38Q8BI21 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm14071-201ENSMUST00000117817 509 ntBASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm11434-201ENSMUST00000122379 629 ntBASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm6082-201ENSMUST00000215204 454 ntBASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm18065-201ENSMUST00000221395 526 ntBASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gm807-202ENSMUST00000224929 408 ntBASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf38Q8BI21 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms