Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ctdp1Q7TSG2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctdp1Q7TSG2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ctdp1Q7TSG2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Gm12015-201ENSMUST00000117065 843 ntBASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctdp1Q7TSG2 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms