Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Gm9192-201ENSMUST00000183221 985 ntBASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Gm9111-201ENSMUST00000219394 709 ntBASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pdzrn3Q69ZS0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdzrn3Q69ZS0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdzrn3Q69ZS0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdzrn3Q69ZS0 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pdzrn3Q69ZS0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Gm12969-201ENSMUST00000120199 1004 ntBASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Gm18059-201ENSMUST00000208073 580 ntBASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Gm45758-201ENSMUST00000212448 1006 ntBASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pdzrn3Q69ZS0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gm13022-201ENSMUST00000121181 285 ntBASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gm9135-201ENSMUST00000182963 990 ntBASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gm23105-201ENSMUST00000083719 134 ntBASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdzrn3Q69ZS0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdzrn3Q69ZS0 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdzrn3Q69ZS0 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.06□□□□□ -0.16
Pdzrn3Q69ZS0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms