Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Gm44806-201ENSMUST00000205574 2303 ntBASIC8.88□□□□□ -0.99
Foxc1Q61572 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Foxc1Q61572 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Foxc1Q61572 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm42463-201ENSMUST00000198041 4886 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm15933-201ENSMUST00000117215 616 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm15547-201ENSMUST00000122152 333 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm19791-201ENSMUST00000180398 859 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm5251-201ENSMUST00000188959 472 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm9678-201ENSMUST00000198979 1149 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Olfr46-202ENSMUST00000211771 1190 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm19208-201ENSMUST00000213861 912 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 AC121804.1-201ENSMUST00000221016 394 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 A1cf-203ENSMUST00000224400 1204 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Olfr844-201ENSMUST00000054106 930 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 AC159195.1-201ENSMUST00000225867 2086 ntBASIC8.87□□□□□ -0.99
Foxc1Q61572 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.99
Foxc1Q61572 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Foxc1Q61572 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm44562-201ENSMUST00000207194 1347 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm18262-201ENSMUST00000222560 1946 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms