Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ClpbQ60649 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.06□□□□□ -0.64
ClpbQ60649 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.06□□□□□ -0.64
ClpbQ60649 Gm13461-201ENSMUST00000120980 662 ntBASIC11.06□□□□□ -0.64
ClpbQ60649 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
ClpbQ60649 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.06□□□□□ -0.64
ClpbQ60649 Gm19353-201ENSMUST00000184561 445 ntBASIC11.06□□□□□ -0.64
ClpbQ60649 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.06□□□□□ -0.64
ClpbQ60649 Gm44100-201ENSMUST00000204329 436 ntBASIC11.06□□□□□ -0.64
ClpbQ60649 Gm45575-201ENSMUST00000210283 548 ntBASIC11.06□□□□□ -0.64
ClpbQ60649 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ClpbQ60649 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.06□□□□□ -0.64
ClpbQ60649 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.06□□□□□ -0.64
ClpbQ60649 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ClpbQ60649 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.06□□□□□ -0.64
ClpbQ60649 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.06□□□□□ -0.64
ClpbQ60649 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ClpbQ60649 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.05□□□□□ -0.64
ClpbQ60649 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
ClpbQ60649 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
ClpbQ60649 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.05□□□□□ -0.64
ClpbQ60649 Gm13809-201ENSMUST00000117921 597 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Gm12616-201ENSMUST00000118594 382 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Gm13408-201ENSMUST00000119822 798 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Gm13935-201ENSMUST00000121859 798 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.05□□□□□ -0.64
ClpbQ60649 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
ClpbQ60649 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.05□□□□□ -0.64
ClpbQ60649 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
ClpbQ60649 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.05□□□□□ -0.64
ClpbQ60649 Gm12624-201ENSMUST00000177615 382 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Gm12621-201ENSMUST00000177760 382 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Gm12615-201ENSMUST00000177970 382 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Gm12622-201ENSMUST00000177975 382 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Gm12627-201ENSMUST00000178412 382 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Gm12625-201ENSMUST00000179122 382 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Gm12614-201ENSMUST00000179586 382 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Gm12613-201ENSMUST00000180323 382 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.05□□□□□ -0.64
ClpbQ60649 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.05□□□□□ -0.64
ClpbQ60649 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
ClpbQ60649 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
ClpbQ60649 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
ClpbQ60649 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ClpbQ60649 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ClpbQ60649 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.04□□□□□ -0.64
ClpbQ60649 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ClpbQ60649 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms