Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm14724-201ENSMUST00000118400 537 ntBASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm2383-201ENSMUST00000181461 807 ntBASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm8100-201ENSMUST00000182906 988 ntBASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm38151-201ENSMUST00000195085 289 ntBASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm2965-201ENSMUST00000198365 343 ntBASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav5d-4Q5R1F6 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm12501-201ENSMUST00000119163 529 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm16505-201ENSMUST00000179981 232 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.85□□□□□ -0.83
Trav5d-4Q5R1F6 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms