Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
R3hdm4Q4VBF2 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Gm4294-201ENSMUST00000105169 614 ntBASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Gm16071-201ENSMUST00000119589 793 ntBASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Olfml3-204ENSMUST00000169286 874 ntBASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Gm5523-201ENSMUST00000180415 997 ntBASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Gm17826-201ENSMUST00000189720 798 ntBASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
R3hdm4Q4VBF2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gm25492-201ENSMUST00000157383 129 ntBASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gm37299-201ENSMUST00000193951 826 ntBASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gm37905-201ENSMUST00000195310 341 ntBASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gm44980-201ENSMUST00000205826 314 ntBASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gm45398-201ENSMUST00000210561 165 ntBASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gm45856-201ENSMUST00000212752 416 ntBASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
R3hdm4Q4VBF2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
R3hdm4Q4VBF2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms