Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Gm44008-201ENSMUST00000204345 412 ntBASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Gm8342-201ENSMUST00000209839 757 ntBASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Gm6722-201ENSMUST00000221586 390 ntBASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Gm15329-201ENSMUST00000121408 155 ntBASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Gm9089-201ENSMUST00000122027 526 ntBASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Gm43852-201ENSMUST00000202098 917 ntBASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.12□□□□□ -0.47
Nlrc4Q3UP24 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Gm14585-201ENSMUST00000120713 634 ntBASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Gm17391-201ENSMUST00000171036 126 ntBASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Gm3786-201ENSMUST00000202659 378 ntBASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Gm43916-201ENSMUST00000205062 967 ntBASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Gm45770-201ENSMUST00000212105 616 ntBASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nlrc4Q3UP24 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms