Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Fndc4Q3TR08 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Gm15276-201ENSMUST00000145953 498 ntBASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Gm6963-201ENSMUST00000147879 379 ntBASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Gm7584-201ENSMUST00000175829 940 ntBASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Fndc4Q3TR08 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm5419-201ENSMUST00000119301 527 ntBASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm15610-201ENSMUST00000120584 195 ntBASIC9.8□□□□□ -0.84
Fndc4Q3TR08 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm25668-201ENSMUST00000157700 129 ntBASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.8□□□□□ -0.84
Fndc4Q3TR08 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms