Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Gm26361-201ENSMUST00000158868 186 ntBASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Gm16505-201ENSMUST00000179981 232 ntBASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Gm27530-201ENSMUST00000184096 98 ntBASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Mir7677-201ENSMUST00000184226 67 ntBASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Gm28686-201ENSMUST00000187404 609 ntBASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Gm38151-201ENSMUST00000195085 289 ntBASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cul4aQ3TCH7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm23949-201ENSMUST00000104027 127 ntBASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm23596-201ENSMUST00000104304 132 ntBASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm12380-201ENSMUST00000119012 544 ntBASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm8566-201ENSMUST00000120174 465 ntBASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm8459-201ENSMUST00000162504 760 ntBASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cul4aQ3TCH7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cul4aQ3TCH7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms