Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx3-2P97503 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.93□□□□□ -0.66
Nkx3-2P97503 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm4726-201ENSMUST00000135604 736 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm6019-201ENSMUST00000148369 736 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm24844-201ENSMUST00000158679 127 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm20614-201ENSMUST00000177106 632 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm44545-201ENSMUST00000208262 746 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm9132-201ENSMUST00000210182 832 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 AC122876.1-201ENSMUST00000217619 825 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm7940-201ENSMUST00000218195 769 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.92□□□□□ -0.66
Nkx3-2P97503 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx3-2P97503 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm15573-201ENSMUST00000119487 540 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm11956-201ENSMUST00000119525 512 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm11783-201ENSMUST00000119549 885 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm14441-201ENSMUST00000121960 540 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm12208-201ENSMUST00000122004 163 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm3150-201ENSMUST00000166418 204 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm12407-201ENSMUST00000180219 324 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm28937-201ENSMUST00000185413 695 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm29400-201ENSMUST00000187208 695 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm28662-201ENSMUST00000188446 695 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm28251-201ENSMUST00000188835 695 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm37318-201ENSMUST00000194325 695 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm38017-201ENSMUST00000194768 695 ntBASIC10.91□□□□□ -0.66
Nkx3-2P97503 Gm37287-201ENSMUST00000195449 695 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms