Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Npas1P97459 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Npas1P97459 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.65□□□□□ -0.86
Npas1P97459 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Gm44798-201ENSMUST00000208123 2410 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Npas1P97459 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Npas1P97459 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Npas1P97459 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Npas1P97459 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Npas1P97459 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Npas1P97459 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.65□□□□□ -0.87
Npas1P97459 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Npas1P97459 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Npas1P97459 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.64□□□□□ -0.87
Npas1P97459 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.64□□□□□ -0.87
Npas1P97459 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.64□□□□□ -0.87
Npas1P97459 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Npas1P97459 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Npas1P97459 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Npas1P97459 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.64□□□□□ -0.87
Npas1P97459 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.64□□□□□ -0.87
Npas1P97459 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.64□□□□□ -0.87
Npas1P97459 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Gm23912-201ENSMUST00000104687 87 ntBASIC9.64□□□□□ -0.87
Npas1P97459 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Npas1P97459 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.64□□□□□ -0.87
Npas1P97459 Rprl1-201ENSMUST00000158050 327 ntBASIC9.64□□□□□ -0.87
Npas1P97459 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.64□□□□□ -0.87
Npas1P97459 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.64□□□□□ -0.87
Npas1P97459 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Npas1P97459 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Npas1P97459 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Npas1P97459 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Npas1P97459 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.64□□□□□ -0.87
Npas1P97459 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Npas1P97459 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Npas1P97459 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Npas1P97459 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.63□□□□□ -0.87
Npas1P97459 Nln-205ENSMUST00000224945 2486 ntBASIC9.63□□□□□ -0.87
Npas1P97459 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.63□□□□□ -0.87
Npas1P97459 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.63□□□□□ -0.87
Npas1P97459 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.63□□□□□ -0.87
Npas1P97459 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.63□□□□□ -0.87
Npas1P97459 Gm13316-201ENSMUST00000140537 691 ntBASIC9.63□□□□□ -0.87
Npas1P97459 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Npas1P97459 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Npas1P97459 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms