Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm43671-201ENSMUST00000200422 433 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm6564-201ENSMUST00000075377 619 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cacna1aP97445 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.66□□□□□ -0.7
Cacna1aP97445 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cacna1aP97445 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cacna1aP97445 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cacna1aP97445 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Cacna1aP97445 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
Cacna1aP97445 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.66□□□□□ -0.7
Cacna1aP97445 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.66□□□□□ -0.7
Cacna1aP97445 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Gm6331-201ENSMUST00000217890 450 ntBASIC10.66□□□□□ -0.7
Cacna1aP97445 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cacna1aP97445 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cacna1aP97445 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.66□□□□□ -0.7
Cacna1aP97445 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cacna1aP97445 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.66□□□□□ -0.7
Cacna1aP97445 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Gm23062-201ENSMUST00000102349 110 ntBASIC10.66□□□□□ -0.7
Cacna1aP97445 Gm25562-201ENSMUST00000104608 133 ntBASIC10.66□□□□□ -0.7
Cacna1aP97445 Gm12345-201ENSMUST00000119288 898 ntBASIC10.66□□□□□ -0.7
Cacna1aP97445 Mir432-201ENSMUST00000157230 75 ntBASIC10.66□□□□□ -0.7
Cacna1aP97445 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.66□□□□□ -0.7
Cacna1aP97445 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cacna1aP97445 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.66□□□□□ -0.7
Cacna1aP97445 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Gm6606-201ENSMUST00000193613 947 ntBASIC10.66□□□□□ -0.7
Cacna1aP97445 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.66□□□□□ -0.7
Cacna1aP97445 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cacna1aP97445 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.65□□□□□ -0.7
Cacna1aP97445 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Gm11560-201ENSMUST00000117567 948 ntBASIC10.65□□□□□ -0.7
Cacna1aP97445 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.65□□□□□ -0.7
Cacna1aP97445 Gm15549-201ENSMUST00000121595 622 ntBASIC10.65□□□□□ -0.7
Cacna1aP97445 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.65□□□□□ -0.7
Cacna1aP97445 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.65□□□□□ -0.7
Cacna1aP97445 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.65□□□□□ -0.7
Cacna1aP97445 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.65□□□□□ -0.7
Cacna1aP97445 Gm9791-201ENSMUST00000060997 447 ntBASIC10.65□□□□□ -0.7
Cacna1aP97445 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms