Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.93□□□□□ -0.5
Vps45P97390 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps45P97390 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps45P97390 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps45P97390 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps45P97390 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps45P97390 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps45P97390 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vps45P97390 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Vps45P97390 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps45P97390 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.93□□□□□ -0.5
Vps45P97390 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps45P97390 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Vps45P97390 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps45P97390 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vps45P97390 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vps45P97390 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.92□□□□□ -0.5
Vps45P97390 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.92□□□□□ -0.5
Vps45P97390 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Vps45P97390 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.92□□□□□ -0.5
Vps45P97390 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Gm13182-201ENSMUST00000122241 312 ntBASIC11.92□□□□□ -0.5
Vps45P97390 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Vps45P97390 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.92□□□□□ -0.5
Vps45P97390 Gm8815-201ENSMUST00000173809 620 ntBASIC11.92□□□□□ -0.5
Vps45P97390 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Gm3793-201ENSMUST00000204973 672 ntBASIC11.92□□□□□ -0.5
Vps45P97390 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.92□□□□□ -0.5
Vps45P97390 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vps45P97390 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.92□□□□□ -0.5
Vps45P97390 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.92□□□□□ -0.5
Vps45P97390 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.92□□□□□ -0.5
Vps45P97390 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vps45P97390 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Vps45P97390 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps45P97390 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps45P97390 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vps45P97390 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.91□□□□□ -0.5
Vps45P97390 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Vps45P97390 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vps45P97390 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.91□□□□□ -0.5
Vps45P97390 Gm11783-201ENSMUST00000119549 885 ntBASIC11.91□□□□□ -0.5
Vps45P97390 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.91□□□□□ -0.5
Vps45P97390 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.91□□□□□ -0.5
Vps45P97390 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.91□□□□□ -0.5
Vps45P97390 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Vps45P97390 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.91□□□□□ -0.5
Vps45P97390 Gm19091-201ENSMUST00000208120 978 ntBASIC11.91□□□□□ -0.5
Vps45P97390 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.91□□□□□ -0.5
Vps45P97390 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.91□□□□□ -0.5
Vps45P97390 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Vps45P97390 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Vps45P97390 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Vps45P97390 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Vps45P97390 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.91□□□□□ -0.5
Vps45P97390 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps45P97390 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms