Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim43cP86449 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.51□□□□□ -0.41
Trim43cP86449 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43cP86449 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.5□□□□□ -0.41
Trim43cP86449 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim43cP86449 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trim43cP86449 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trim43cP86449 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim43cP86449 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.5□□□□□ -0.41
Trim43cP86449 Gm15352-201ENSMUST00000118696 270 ntBASIC12.5□□□□□ -0.41
Trim43cP86449 Gm15549-201ENSMUST00000121595 622 ntBASIC12.5□□□□□ -0.41
Trim43cP86449 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim43cP86449 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.5□□□□□ -0.41
Trim43cP86449 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.5□□□□□ -0.41
Trim43cP86449 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim43cP86449 Mir7686-201ENSMUST00000200604 57 ntBASIC12.5□□□□□ -0.41
Trim43cP86449 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Trim43cP86449 Gm8574-201ENSMUST00000203207 924 ntBASIC12.5□□□□□ -0.41
Trim43cP86449 Gm6905-201ENSMUST00000205729 511 ntBASIC12.5□□□□□ -0.41
Trim43cP86449 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.5□□□□□ -0.41
Trim43cP86449 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim43cP86449 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim43cP86449 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trim43cP86449 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim43cP86449 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim43cP86449 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.5□□□□□ -0.41
Trim43cP86449 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trim43cP86449 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trim43cP86449 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim43cP86449 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim43cP86449 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim43cP86449 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim43cP86449 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.49□□□□□ -0.41
Trim43cP86449 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim43cP86449 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim43cP86449 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.49□□□□□ -0.41
Trim43cP86449 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.49□□□□□ -0.41
Trim43cP86449 Gm11836-201ENSMUST00000121022 441 ntBASIC12.49□□□□□ -0.41
Trim43cP86449 Gm22144-201ENSMUST00000157402 102 ntBASIC12.49□□□□□ -0.41
Trim43cP86449 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.49□□□□□ -0.41
Trim43cP86449 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.49□□□□□ -0.41
Trim43cP86449 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Gm19208-201ENSMUST00000213861 912 ntBASIC12.49□□□□□ -0.41
Trim43cP86449 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim43cP86449 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim43cP86449 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trim43cP86449 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim43cP86449 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.49□□□□□ -0.41
Trim43cP86449 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms