Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SgcbP82349 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
SgcbP82349 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SgcbP82349 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.33□□□□□ -0.76
SgcbP82349 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.33□□□□□ -0.76
SgcbP82349 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
SgcbP82349 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Gm8872-201ENSMUST00000197475 1341 ntBASIC10.33□□□□□ -0.76
SgcbP82349 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcbP82349 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.32□□□□□ -0.76
SgcbP82349 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SgcbP82349 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.32□□□□□ -0.76
SgcbP82349 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Gm24541-201ENSMUST00000103871 96 ntBASIC10.32□□□□□ -0.76
SgcbP82349 Gm14193-201ENSMUST00000105067 153 ntBASIC10.32□□□□□ -0.76
SgcbP82349 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
SgcbP82349 Gm8731-201ENSMUST00000118088 412 ntBASIC10.32□□□□□ -0.76
SgcbP82349 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Mir8093-201ENSMUST00000185043 137 ntBASIC10.32□□□□□ -0.76
SgcbP82349 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.32□□□□□ -0.76
SgcbP82349 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.32□□□□□ -0.76
SgcbP82349 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC10.32□□□□□ -0.76
SgcbP82349 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Gm17917-201ENSMUST00000218561 953 ntBASIC10.32□□□□□ -0.76
SgcbP82349 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.32□□□□□ -0.76
SgcbP82349 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Pck2-205ENSMUST00000226352 2784 ntBASIC10.32□□□□□ -0.76
SgcbP82349 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.32□□□□□ -0.76
SgcbP82349 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SgcbP82349 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.32□□□□□ -0.76
SgcbP82349 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SgcbP82349 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SgcbP82349 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SgcbP82349 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.31□□□□□ -0.76
SgcbP82349 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Gm7666-201ENSMUST00000146631 819 ntBASIC10.31□□□□□ -0.76
SgcbP82349 Gm22144-201ENSMUST00000157402 102 ntBASIC10.31□□□□□ -0.76
SgcbP82349 Gm3150-201ENSMUST00000166418 204 ntBASIC10.31□□□□□ -0.76
SgcbP82349 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Gm37835-201ENSMUST00000193305 361 ntBASIC10.31□□□□□ -0.76
SgcbP82349 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.31□□□□□ -0.76
SgcbP82349 Mir7686-201ENSMUST00000200604 57 ntBASIC10.31□□□□□ -0.76
SgcbP82349 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.31□□□□□ -0.76
SgcbP82349 Gm43852-201ENSMUST00000202098 917 ntBASIC10.31□□□□□ -0.76
SgcbP82349 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms