Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Atf1P81269 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Atf1P81269 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Atf1P81269 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.94□□□□□ -0.82
Atf1P81269 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.94□□□□□ -0.82
Atf1P81269 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.94□□□□□ -0.82
Atf1P81269 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.94□□□□□ -0.82
Atf1P81269 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Atf1P81269 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.94□□□□□ -0.82
Atf1P81269 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.94□□□□□ -0.82
Atf1P81269 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.94□□□□□ -0.82
Atf1P81269 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.94□□□□□ -0.82
Atf1P81269 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Gm8566-201ENSMUST00000120174 465 ntBASIC9.94□□□□□ -0.82
Atf1P81269 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.94□□□□□ -0.82
Atf1P81269 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.94□□□□□ -0.82
Atf1P81269 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.94□□□□□ -0.82
Atf1P81269 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Gm38000-201ENSMUST00000192390 1215 ntBASIC9.94□□□□□ -0.82
Atf1P81269 Gm5714-201ENSMUST00000197343 566 ntBASIC9.94□□□□□ -0.82
Atf1P81269 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.94□□□□□ -0.82
Atf1P81269 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.94□□□□□ -0.82
Atf1P81269 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Atf1P81269 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.94□□□□□ -0.82
Atf1P81269 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.94□□□□□ -0.82
Atf1P81269 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Atf1P81269 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Atf1P81269 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Atf1P81269 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Atf1P81269 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Atf1P81269 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.93□□□□□ -0.82
Atf1P81269 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Atf1P81269 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.93□□□□□ -0.82
Atf1P81269 Gm14724-201ENSMUST00000118400 537 ntBASIC9.93□□□□□ -0.82
Atf1P81269 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Atf1P81269 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Atf1P81269 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.93□□□□□ -0.82
Atf1P81269 Gm44008-201ENSMUST00000204345 412 ntBASIC9.93□□□□□ -0.82
Atf1P81269 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.93□□□□□ -0.82
Atf1P81269 Gm45575-201ENSMUST00000210283 548 ntBASIC9.93□□□□□ -0.82
Atf1P81269 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Atf1P81269 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms