Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.4□□□□□ -0.74
Lsm3P62311 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lsm3P62311 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Lsm3P62311 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.4□□□□□ -0.75
Lsm3P62311 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Lsm3P62311 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.4□□□□□ -0.75
Lsm3P62311 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
Lsm3P62311 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Lsm3P62311 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Lsm3P62311 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.39□□□□□ -0.75
Lsm3P62311 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Lsm3P62311 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.39□□□□□ -0.75
Lsm3P62311 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Lsm3P62311 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Lsm3P62311 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.39□□□□□ -0.75
Lsm3P62311 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Lsm3P62311 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Lsm3P62311 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.39□□□□□ -0.75
Lsm3P62311 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.39□□□□□ -0.75
Lsm3P62311 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Lsm3P62311 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Lsm3P62311 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.39□□□□□ -0.75
Lsm3P62311 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Lsm3P62311 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.38□□□□□ -0.75
Lsm3P62311 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.38□□□□□ -0.75
Lsm3P62311 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Lsm3P62311 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.38□□□□□ -0.75
Lsm3P62311 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Lsm3P62311 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Gm4984-201ENSMUST00000115987 360 ntBASIC10.38□□□□□ -0.75
Lsm3P62311 Gm12164-201ENSMUST00000121695 551 ntBASIC10.38□□□□□ -0.75
Lsm3P62311 Gm13570-201ENSMUST00000140763 309 ntBASIC10.38□□□□□ -0.75
Lsm3P62311 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Gm27023-201ENSMUST00000182372 285 ntBASIC10.38□□□□□ -0.75
Lsm3P62311 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.38□□□□□ -0.75
Lsm3P62311 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Lsm3P62311 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Lsm3P62311 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 AC158779.1-201ENSMUST00000228912 3861 ntBASIC10.38□□□□□ -0.75
Lsm3P62311 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC10.38□□□□□ -0.75
Lsm3P62311 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms