Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.28□□□□□ -0.92
Lmo4P61969 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Lmo4P61969 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.28□□□□□ -0.92
Lmo4P61969 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Lmo4P61969 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Lmo4P61969 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.27□□□□□ -0.92
Lmo4P61969 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.92
Lmo4P61969 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Lmo4P61969 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Lmo4P61969 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Lmo4P61969 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.27□□□□□ -0.93
Lmo4P61969 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Lmo4P61969 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.27□□□□□ -0.93
Lmo4P61969 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC9.27□□□□□ -0.93
Lmo4P61969 Gm15617-201ENSMUST00000118973 771 ntBASIC9.27□□□□□ -0.93
Lmo4P61969 Gm13022-201ENSMUST00000121181 285 ntBASIC9.27□□□□□ -0.93
Lmo4P61969 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.27□□□□□ -0.93
Lmo4P61969 AC238811.4-201ENSMUST00000178019 1246 ntBASIC9.27□□□□□ -0.93
Lmo4P61969 AC238940.3-201ENSMUST00000178830 1246 ntBASIC9.27□□□□□ -0.93
Lmo4P61969 Gm26982-201ENSMUST00000182250 1151 ntBASIC9.27□□□□□ -0.93
Lmo4P61969 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.27□□□□□ -0.93
Lmo4P61969 Gm35713-201ENSMUST00000210516 199 ntBASIC9.27□□□□□ -0.93
Lmo4P61969 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.27□□□□□ -0.93
Lmo4P61969 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC9.27□□□□□ -0.93
Lmo4P61969 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Lmo4P61969 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.27□□□□□ -0.93
Lmo4P61969 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.27□□□□□ -0.93
Lmo4P61969 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Lmo4P61969 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Lmo4P61969 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.26□□□□□ -0.93
Lmo4P61969 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Lmo4P61969 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC9.26□□□□□ -0.93
Lmo4P61969 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Mir453-201ENSMUST00000104732 82 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.26□□□□□ -0.93
Lmo4P61969 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.26□□□□□ -0.93
Lmo4P61969 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Lmo4P61969 Gm16030-201ENSMUST00000159098 603 ntBASIC9.26□□□□□ -0.93
Lmo4P61969 Gm8723-201ENSMUST00000166076 820 ntBASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms