Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.23□□□□□ -0.77
Sf3b6P59708 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.23□□□□□ -0.77
Sf3b6P59708 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.23□□□□□ -0.77
Sf3b6P59708 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.23□□□□□ -0.77
Sf3b6P59708 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.23□□□□□ -0.77
Sf3b6P59708 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.23□□□□□ -0.77
Sf3b6P59708 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.23□□□□□ -0.77
Sf3b6P59708 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b6P59708 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sf3b6P59708 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.22□□□□□ -0.77
Sf3b6P59708 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm14644-201ENSMUST00000116671 647 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm14381-201ENSMUST00000122105 414 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm6621-201ENSMUST00000193251 772 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm4607-201ENSMUST00000206649 577 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm6334-201ENSMUST00000207083 228 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm21769-201ENSMUST00000211922 111 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm5950-201ENSMUST00000213337 772 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.22□□□□□ -0.77
Sf3b6P59708 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b6P59708 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sf3b6P59708 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms