Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.87□□□□□ -0.67
Nup43P59235 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Gm12247-201ENSMUST00000117585 670 ntBASIC10.87□□□□□ -0.67
Nup43P59235 Gm11956-201ENSMUST00000119525 512 ntBASIC10.87□□□□□ -0.67
Nup43P59235 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.87□□□□□ -0.67
Nup43P59235 Gm23958-201ENSMUST00000157207 105 ntBASIC10.87□□□□□ -0.67
Nup43P59235 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.87□□□□□ -0.67
Nup43P59235 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Nup43P59235 Gm43377-201ENSMUST00000201640 455 ntBASIC10.87□□□□□ -0.67
Nup43P59235 Gm43852-201ENSMUST00000202098 917 ntBASIC10.87□□□□□ -0.67
Nup43P59235 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.87□□□□□ -0.67
Nup43P59235 Gm43966-201ENSMUST00000203301 612 ntBASIC10.87□□□□□ -0.67
Nup43P59235 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.87□□□□□ -0.67
Nup43P59235 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nup43P59235 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nup43P59235 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.87□□□□□ -0.67
Nup43P59235 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nup43P59235 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.87□□□□□ -0.67
Nup43P59235 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nup43P59235 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.86□□□□□ -0.67
Nup43P59235 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nup43P59235 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Nup43P59235 Gm22711-201ENSMUST00000116890 133 ntBASIC10.86□□□□□ -0.67
Nup43P59235 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Gm15352-201ENSMUST00000118696 270 ntBASIC10.86□□□□□ -0.67
Nup43P59235 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Nup43P59235 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.86□□□□□ -0.67
Nup43P59235 Gm3329-201ENSMUST00000159873 556 ntBASIC10.86□□□□□ -0.67
Nup43P59235 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.86□□□□□ -0.67
Nup43P59235 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.86□□□□□ -0.67
Nup43P59235 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Gm18753-201ENSMUST00000201000 566 ntBASIC10.86□□□□□ -0.67
Nup43P59235 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.86□□□□□ -0.67
Nup43P59235 Gm44008-201ENSMUST00000204345 412 ntBASIC10.86□□□□□ -0.67
Nup43P59235 Gm8342-201ENSMUST00000209839 757 ntBASIC10.86□□□□□ -0.67
Nup43P59235 Gm2517-201ENSMUST00000215651 348 ntBASIC10.86□□□□□ -0.67
Nup43P59235 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.86□□□□□ -0.67
Nup43P59235 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nup43P59235 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nup43P59235 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nup43P59235 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nup43P59235 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Nup43P59235 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.85□□□□□ -0.67
Nup43P59235 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nup43P59235 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms