Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.95□□□□□ -0.34
Rrp1P56183 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Rrp1P56183 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.95□□□□□ -0.34
Rrp1P56183 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.95□□□□□ -0.34
Rrp1P56183 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.95□□□□□ -0.34
Rrp1P56183 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.95□□□□□ -0.34
Rrp1P56183 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.95□□□□□ -0.34
Rrp1P56183 Gm6082-201ENSMUST00000215204 454 ntBASIC12.95□□□□□ -0.34
Rrp1P56183 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.95□□□□□ -0.34
Rrp1P56183 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.95□□□□□ -0.34
Rrp1P56183 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.95□□□□□ -0.34
Rrp1P56183 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.95□□□□□ -0.34
Rrp1P56183 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rrp1P56183 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.95□□□□□ -0.34
Rrp1P56183 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.95□□□□□ -0.34
Rrp1P56183 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rrp1P56183 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.94□□□□□ -0.34
Rrp1P56183 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Rrp1P56183 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.94□□□□□ -0.34
Rrp1P56183 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rrp1P56183 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rrp1P56183 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Rrp1P56183 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Gm13296-201ENSMUST00000117854 997 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.94□□□□□ -0.34
Rrp1P56183 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.94□□□□□ -0.34
Rrp1P56183 Gm25668-201ENSMUST00000157700 129 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 Gm17376-201ENSMUST00000166016 84 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Gm20495-201ENSMUST00000173902 235 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Rrp1P56183 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.94□□□□□ -0.34
Rrp1P56183 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.94□□□□□ -0.34
Rrp1P56183 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rrp1P56183 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rrp1P56183 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.94□□□□□ -0.34
Rrp1P56183 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.94□□□□□ -0.34
Rrp1P56183 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp1P56183 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.93□□□□□ -0.34
Rrp1P56183 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rrp1P56183 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rrp1P56183 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rrp1P56183 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp1P56183 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms