Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Msh6P54276 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.51□□□□□ -0.09
Msh6P54276 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Msh6P54276 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Btrc-209ENSMUST00000224478 2194 ntBASIC14.51□□□□□ -0.09
Msh6P54276 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Msh6P54276 Gm13135-201ENSMUST00000117628 3121 ntBASIC14.51□□□□□ -0.09
Msh6P54276 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msh6P54276 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh6P54276 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC14.5□□□□□ -0.09
Msh6P54276 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Gm5555-201ENSMUST00000120352 1111 ntBASIC14.5□□□□□ -0.09
Msh6P54276 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.5□□□□□ -0.09
Msh6P54276 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh6P54276 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Gm34379-201ENSMUST00000195036 290 ntBASIC14.5□□□□□ -0.09
Msh6P54276 Gm30946-201ENSMUST00000198288 724 ntBASIC14.5□□□□□ -0.09
Msh6P54276 Gm5599-201ENSMUST00000209602 788 ntBASIC14.5□□□□□ -0.09
Msh6P54276 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Gm3318-201ENSMUST00000217604 1183 ntBASIC14.5□□□□□ -0.09
Msh6P54276 BC106175-202ENSMUST00000219344 1213 ntBASIC14.5□□□□□ -0.09
Msh6P54276 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh6P54276 AC154305.2-201ENSMUST00000225813 901 ntBASIC14.5□□□□□ -0.09
Msh6P54276 AC159002.1-201ENSMUST00000226714 924 ntBASIC14.5□□□□□ -0.09
Msh6P54276 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh6P54276 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Msh6P54276 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Msh6P54276 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Msh6P54276 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC14.5□□□□□ -0.09
Msh6P54276 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.5□□□□□ -0.09
Msh6P54276 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msh6P54276 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.49□□□□□ -0.09
Msh6P54276 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Msh6P54276 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.49□□□□□ -0.09
Msh6P54276 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.49□□□□□ -0.09
Msh6P54276 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.49□□□□□ -0.09
Msh6P54276 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Msh6P54276 Gm15617-201ENSMUST00000118973 771 ntBASIC14.49□□□□□ -0.09
Msh6P54276 Gm13981-201ENSMUST00000122360 447 ntBASIC14.49□□□□□ -0.09
Msh6P54276 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.49□□□□□ -0.09
Msh6P54276 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Gm25677-201ENSMUST00000174983 72 ntBASIC14.49□□□□□ -0.09
Msh6P54276 Gm26976-201ENSMUST00000182929 908 ntBASIC14.49□□□□□ -0.09
Msh6P54276 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Msh6P54276 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.49□□□□□ -0.09
Msh6P54276 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Msh6P54276 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.49□□□□□ -0.09
Msh6P54276 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Msh6P54276 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms