Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LtbrP50284 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LtbrP50284 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LtbrP50284 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LtbrP50284 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LtbrP50284 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LtbrP50284 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LtbrP50284 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
LtbrP50284 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.71□□□□□ -0.22
LtbrP50284 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LtbrP50284 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.71□□□□□ -0.22
LtbrP50284 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LtbrP50284 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LtbrP50284 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LtbrP50284 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LtbrP50284 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LtbrP50284 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
LtbrP50284 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LtbrP50284 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LtbrP50284 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.7□□□□□ -0.22
LtbrP50284 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LtbrP50284 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.7□□□□□ -0.22
LtbrP50284 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.7□□□□□ -0.22
LtbrP50284 Gm14034-201ENSMUST00000120147 551 ntBASIC13.7□□□□□ -0.22
LtbrP50284 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.7□□□□□ -0.22
LtbrP50284 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.7□□□□□ -0.22
LtbrP50284 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LtbrP50284 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.7□□□□□ -0.22
LtbrP50284 Gm37631-201ENSMUST00000192275 364 ntBASIC13.7□□□□□ -0.22
LtbrP50284 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.7□□□□□ -0.22
LtbrP50284 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LtbrP50284 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
LtbrP50284 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LtbrP50284 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC13.7□□□□□ -0.22
LtbrP50284 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.7□□□□□ -0.22
LtbrP50284 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LtbrP50284 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LtbrP50284 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.69□□□□□ -0.22
LtbrP50284 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.69□□□□□ -0.22
LtbrP50284 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Gm11652-201ENSMUST00000117842 1267 ntBASIC13.69□□□□□ -0.22
LtbrP50284 Gm5419-201ENSMUST00000119301 527 ntBASIC13.69□□□□□ -0.22
LtbrP50284 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Gm22379-201ENSMUST00000157480 131 ntBASIC13.69□□□□□ -0.22
LtbrP50284 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC13.69□□□□□ -0.22
LtbrP50284 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LtbrP50284 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Gm21139-201ENSMUST00000186594 877 ntBASIC13.69□□□□□ -0.22
LtbrP50284 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.69□□□□□ -0.22
LtbrP50284 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC13.69□□□□□ -0.22
LtbrP50284 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LtbrP50284 Gm43854-201ENSMUST00000200418 394 ntBASIC13.69□□□□□ -0.22
LtbrP50284 Gm18561-201ENSMUST00000206027 804 ntBASIC13.69□□□□□ -0.22
LtbrP50284 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.69□□□□□ -0.22
LtbrP50284 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.69□□□□□ -0.22
LtbrP50284 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LtbrP50284 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms