Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Rfx3P48381 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Gm5705-201ENSMUST00000066241 711 ntBASIC10.4□□□□□ -0.74
Rfx3P48381 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Rfx3P48381 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Rfx3P48381 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rfx3P48381 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rfx3P48381 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.4□□□□□ -0.75
Rfx3P48381 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.4□□□□□ -0.75
Rfx3P48381 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rfx3P48381 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.4□□□□□ -0.75
Rfx3P48381 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rfx3P48381 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rfx3P48381 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.4□□□□□ -0.75
Rfx3P48381 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rfx3P48381 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Rfx3P48381 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rfx3P48381 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Rfx3P48381 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rfx3P48381 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.39□□□□□ -0.75
Rfx3P48381 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.39□□□□□ -0.75
Rfx3P48381 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rfx3P48381 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.39□□□□□ -0.75
Rfx3P48381 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Gm16570-201ENSMUST00000161951 436 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Rfx3P48381 Gm25890-201ENSMUST00000177643 165 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm22614-201ENSMUST00000178300 165 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Gm29615-201ENSMUST00000185371 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm28224-201ENSMUST00000186078 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm29001-201ENSMUST00000186177 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm28292-201ENSMUST00000186593 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm28101-201ENSMUST00000187608 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm29076-201ENSMUST00000187689 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm28302-201ENSMUST00000187931 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm28646-201ENSMUST00000188220 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm28205-201ENSMUST00000189177 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm29032-201ENSMUST00000189797 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm28695-201ENSMUST00000190300 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm37448-201ENSMUST00000192795 697 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Rfx3P48381 Gm17812-201ENSMUST00000204935 318 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm45224-201ENSMUST00000208203 414 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm17827-201ENSMUST00000211825 742 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Rfx3P48381 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Gm22042-201ENSMUST00000082989 165 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm26110-201ENSMUST00000083971 165 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Rfx3P48381 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Rfx3P48381 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.39□□□□□ -0.75
Rfx3P48381 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.39□□□□□ -0.75
Rfx3P48381 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Rfx3P48381 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.39□□□□□ -0.75
Rfx3P48381 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Rfx3P48381 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.38□□□□□ -0.75
Rfx3P48381 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rfx3P48381 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms